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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs76983576 chr12:94829101 T/C C6orf176 chr6:166337536-166401527:- -0.54 -6.11 2.07E-9 Box Plot
THCA rs76985944 chr11:3384550 A/T LAMA4 chr6:112429963-112576141:- 0.31 5.98 4.4E-9 Box Plot
THCA rs77023030 chr15:52573016 A/T ODF2L chr1:86812507-86862025:- -0.44 -5.87 8.01E-9 Box Plot
THCA rs7702922 chr5:45882769 A/T LOC647121 chr1:121260910-121313686:+ 0.38 8.07 5.57E-15 Box Plot
THCA rs7703057 chr5:176595522 G/A LOC388955 chr2:63849182-63850159:- -0.84 -22.38 1.94E-76 Box Plot
THCA rs7704683 chr5:45923626 A/C LOC647121 chr1:121260910-121313686:+ 0.37 7.86 2.62E-14 Box Plot
THCA rs7704686 chr5:49844829 T/A LOC647121 chr1:121260910-121313686:+ -0.37 -7.81 3.62E-14 Box Plot
THCA rs7705285 chr5:49621413 T/G LOC647121 chr1:121260910-121313686:+ 0.36 7.73 6.49E-14 Box Plot
THCA rs7705436 chr5:49750769 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.69E-14 Box Plot
THCA rs7705554 chr5:49838733 A/C LOC647121 chr1:121260910-121313686:+ -0.37 -7.63 1.3E-13 Box Plot
THCA rs77055881 chr8:11790581 T/C SGK223 chr8:8175258-8244008:- -0.46 -8.48 2.8E-16 Box Plot
THCA rs7705696 chr5:45712489 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.23 1.75E-15 Box Plot
THCA rs7706116 chr5:45742624 G/T LOC647121 chr1:121260910-121313686:+ 0.38 8.07 5.66E-15 Box Plot
THCA rs7706140 chr5:45474814 A/C LOC647121 chr1:121260910-121313686:+ 0.34 7.25 1.65E-12 Box Plot
THCA rs7706612 chr5:176682734 C/T LOC388955 chr2:63849182-63850159:- 0.38 9.01 5.13E-18 Box Plot